Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yggt family protein | TPANIC_RS03310 | Not Available | - | 731602 - 732210 | 22694.1 |
| dna polymerase iii subunit alpha | TPANIC_RS03315 | Not Available | - | 732207 - 735719 | 132320.0 |
| Trna-arg | Not Available | Not Available | + | 735838 - 735911 | Not Available |
| d-alanine--d-alanine ligase family protein | TPANIC_RS05335 | Not Available | - | 735873 - 737063 | 42730.4 |
| cdp-alcohol phosphatidyltransferase family protein | TPANIC_RS03325 | Not Available | - | 737065 - 738066 | 37671.7 |
| glycine--trna ligase | TPANIC_RS03330 | Not Available | - | 738130 - 739518 | 52679.8 |
| glutamate--trna ligase | TPANIC_RS03335 | Not Available | - | 739653 - 741266 | 59843.0 |
| smr/muts family protein | TPANIC_RS03340 | Not Available | + | 741444 - 742052 | 22442.3 |
| trab/gumn family protein | TPANIC_RS03345 | Not Available | + | 742145 - 743056 | 34008.4 |
| hypothetical protein | TPANIC_RS03350 | Not Available | - | 743068 - 743346 | 10266.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
