Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
268173 bp
Thymine Count
269822 bp
Guanine Count
302933 bp
Cytosine Count
298660 bp
Genome Length
1139633 bp
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | TPANIC_RS03110 | Not Available | + | 688562 - 689386 | 31273.5 |
| cher family methyltransferase | TPANIC_RS03115 | Not Available | + | 689556 - 690467 | 34399.1 |
| chemotaxis response regulator protein-glutamate methylesterase | TPANIC_RS03120 | Not Available | + | 690514 - 691725 | 44101.4 |
| tryptophan--trna ligase | TPANIC_RS03125 | Not Available | + | 691830 - 692843 | 37564.5 |
| bifunctional methionine sulfoxide reductase b/a protein | TPANIC_RS03130 | Not Available | + | 692984 - 693859 | 32755.4 |
| nad-dependent dna ligase liga | TPANIC_RS03135 | Not Available | + | 693978 - 696449 | 91103.5 |
| dna repair protein reco | TPANIC_RS03140 | Not Available | - | 696484 - 697254 | 28128.2 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | TPANIC_RS03145 | Not Available | - | 697292 - 698242 | 36176.0 |
| hypothetical protein | TPANIC_RS03150 | Not Available | - | 698466 - 698900 | 15395.4 |
| Trna-arg | Not Available | Not Available | + | 698981 - 699054 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
