Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
268173 bp
Thymine Count
269822 bp
Guanine Count
302933 bp
Cytosine Count
298660 bp
Genome Length
1139633 bp
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| asparagine--trna ligase | TPANIC_RS03010 | Not Available | + | 661264 - 662835 | 57800.8 |
| major outer sheath n-terminal domain-containing protein | TPANIC_RS03015 | Not Available | + | 663202 - 664926 | 63238.7 |
| fe-s cluster assembly atpase sufc | TPANIC_RS03020 | Not Available | + | 665068 - 665847 | 28258.1 |
| fe-s cluster assembly protein sufb | TPANIC_RS03025 | Not Available | + | 665928 - 667367 | 54109.5 |
| fe-s cluster assembly protein sufd | TPANIC_RS03030 | Not Available | + | 667394 - 668542 | 43027.2 |
| cysteine desulfurase | TPANIC_RS03035 | Not Available | + | 668539 - 669753 | 43853.6 |
| fe-s cluster assembly sulfur transfer protein sufu | TPANIC_RS03040 | Not Available | + | 669804 - 670247 | 16213.6 |
| ribose-5-phosphate isomerase rpia | TPANIC_RS03045 | Not Available | + | 670268 - 671032 | 27574.2 |
| duf2715 domain-containing protein | TPANIC_RS03050 | Not Available | - | 671059 - 671388 | 12257.6 |
| duf2715 domain-containing protein | TPANIC_RS03055 | Not Available | - | 671402 - 671791 | 13689.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
