Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
268173 bp
Thymine Count
269822 bp
Guanine Count
302933 bp
Cytosine Count
298660 bp
Genome Length
1139633 bp
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | + | 643748 - 643820 | Not Available |
| Trna-pro | Not Available | Not Available | + | 643831 - 643905 | Not Available |
| Trna-asp | Not Available | Not Available | + | 643957 - 644030 | Not Available |
| Trna-met | Not Available | Not Available | + | 644100 - 644172 | Not Available |
| m15 family metallopeptidase | TPANIC_RS02925 | Not Available | + | 644332 - 645834 | 58271.6 |
| hypothetical protein | TPANIC_RS02930 | Not Available | + | 645885 - 647804 | 71277.8 |
| duf2147 domain-containing protein | TPANIC_RS02935 | Not Available | - | 647839 - 648498 | 24149.3 |
| adenylate kinase family protein | TPANIC_RS02940 | Not Available | - | 648526 - 649161 | 22934.8 |
| polynucleotide adenylyltransferase pcnb | TPANIC_RS02945 | Not Available | - | 649185 - 650297 | 41318.5 |
| hypothetical protein | TPANIC_RS02950 | Not Available | - | 650405 - 652468 | 75827.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
