Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
268173 bp
Thymine Count
269822 bp
Guanine Count
302933 bp
Cytosine Count
298660 bp
Genome Length
1139633 bp
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | TPANIC_RS02805 | Not Available | - | 618008 - 618640 | 22075.2 |
| aminopeptidase p family protein | TPANIC_RS02810 | Not Available | - | 618762 - 621086 | 83727.7 |
| tpm domain-containing protein | TPANIC_RS02815 | Not Available | - | 621111 - 621944 | 30438.0 |
| lema family protein | TPANIC_RS02820 | Not Available | - | 621983 - 622648 | 24315.1 |
| fmn-binding protein | TPANIC_RS02825 | Not Available | - | 622666 - 623748 | 38635.8 |
| penicillin-binding tp47 domain a-containing protein | TPANIC_RS02830 | Not Available | - | 623858 - 625162 | 47667.8 |
| phosphoenolpyruvate--protein phosphotransferase | TPANIC_RS02835 | Not Available | + | 625274 - 627331 | 73164.5 |
| peptide chain release factor 2 | TPANIC_RS02840 | Not Available | + | 627379 - 628501 | 42154.9 |
| hypothetical protein | TPANIC_RS02845 | Not Available | + | 628393 - 630237 | 68124.7 |
| signal recognition particle-docking protein ftsy | TPANIC_RS02850 | Not Available | + | 630244 - 631131 | 31929.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
