Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
268173 bp
Thymine Count
269822 bp
Guanine Count
302933 bp
Cytosine Count
298660 bp
Genome Length
1139633 bp
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nickel/cobalt transporter | TPANIC_RS02750 | Not Available | + | 605758 - 606666 | 32208.3 |
| trna uracil 4-sulfurtransferase thii | TPANIC_RS02755 | Not Available | + | 606728 - 607933 | 44642.2 |
| transketolase | TPANIC_RS02760 | Not Available | - | 607986 - 609971 | 71147.0 |
| ygcg family protein | TPANIC_RS02765 | Not Available | - | 610082 - 610942 | 30180.2 |
| n-acetylneuraminate synthase family protein | TPANIC_RS02770 | Not Available | + | 611104 - 612240 | 40534.8 |
| j domain-containing protein | TPANIC_RS02775 | Not Available | + | 612231 - 612644 | 15724.7 |
| hypothetical protein | TPANIC_RS05430 | Not Available | + | 612641 - 614677 | 76528.6 |
| duf459 domain-containing protein | TPANIC_RS05320 | Not Available | - | 614559 - 615776 | 45861.4 |
| mboat family o-acyltransferase | TPANIC_RS02795 | Not Available | - | 615790 - 617277 | 56859.6 |
| periplasmic-type flagellar collar protein flbb | TPANIC_RS02800 | Not Available | - | 617309 - 617908 | 22567.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
