Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit | TPANIC_RS02700 | Not Available | + | 594672 - 597116 | 91588.0 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | TPANIC_RS02705 | Not Available | - | 597157 - 598644 | 53784.2 |
| phosphatase pap2 family protein | TPANIC_RS02710 | Not Available | - | 598648 - 599736 | 38681.6 |
| hypothetical protein | TPANIC_RS02715 | Not Available | - | 599749 - 600282 | 20173.0 |
| Trna-cys | Not Available | Not Available | + | 600358 - 600429 | Not Available |
| ai-2e family transporter | TPANIC_RS02725 | Not Available | + | 600526 - 601737 | 45286.6 |
| had family hydrolase | TPANIC_RS02730 | Not Available | + | 601697 - 602440 | 27519.3 |
| dicarboxylate/amino acid:cation symporter | TPANIC_RS02735 | Not Available | - | 602514 - 603695 | 41542.3 |
| aspartate--ammonia ligase | TPANIC_RS02740 | Not Available | - | 603918 - 604910 | 36858.1 |
| duf1007 family protein | TPANIC_RS02745 | Not Available | + | 605015 - 605728 | 27763.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
