Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
268173 bp
Thymine Count
269822 bp
Guanine Count
302933 bp
Cytosine Count
298660 bp
Genome Length
1139633 bp
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-asn | Not Available | Not Available | + | 583020 - 583092 | Not Available |
| anti-sigma factor antagonist | TPANIC_RS02650 | Not Available | + | 583285 - 583650 | 13371.5 |
| gtpase era | TPANIC_RS02655 | Not Available | + | 583780 - 584739 | 35744.3 |
| diphosphate--fructose-6-phosphate 1-phosphotransferase | TPANIC_RS02660 | Not Available | - | 584736 - 586457 | 62430.6 |
| holliday junction branch migration protein ruva | TPANIC_RS02665 | Not Available | - | 586517 - 587200 | 24400.4 |
| endonuclease/exonuclease/phosphatase family protein | TPANIC_RS02670 | Not Available | - | 587242 - 589110 | 68209.7 |
| galactose abc transporter substrate-binding protein | TPANIC_RS02675 | Not Available | - | 589135 - 590199 | 38367.4 |
| s1c family serine protease | TPANIC_RS02680 | Not Available | - | 590284 - 591999 | 62737.7 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | TPANIC_RS02685 | Not Available | - | 591996 - 593126 | 38886.9 |
| upf0164 family protein | TPANIC_RS02695 | Not Available | + | 593270 - 594574 | 46811.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
