Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
268173 bp
Thymine Count
269822 bp
Guanine Count
302933 bp
Cytosine Count
298660 bp
Genome Length
1139633 bp
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase dimerization/phospho-acceptor domain-containing protein | TPANIC_RS02545 | Not Available | - | 562502 - 563326 | 31493.8 |
| hypothetical protein | TPANIC_RS02550 | Not Available | - | 563323 - 564594 | 48237.4 |
| cvpa family protein | TPANIC_RS02555 | Not Available | - | 564605 - 565084 | 17810.9 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | TPANIC_RS02560 | Not Available | - | 565081 - 566235 | 42051.7 |
| endopeptidase la | TPANIC_RS02565 | Not Available | - | 566239 - 568884 | 97733.9 |
| elongation factor p | TPANIC_RS02570 | Not Available | + | 569020 - 569583 | 21044.1 |
| helicase-related protein | TPANIC_RS02580 | Not Available | + | 569731 - 571737 | 75457.6 |
| v-type atp synthase subunit d | TPANIC_RS02585 | Not Available | - | 571785 - 572414 | 23927.5 |
| v-type atp synthase subunit b | TPANIC_RS02590 | Not Available | - | 572509 - 573951 | 53060.1 |
| v-type atp synthase subunit a | TPANIC_RS02595 | Not Available | - | 573948 - 575765 | 66744.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
