Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
268173 bp
Thymine Count
269822 bp
Guanine Count
302933 bp
Cytosine Count
298660 bp
Genome Length
1139633 bp
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| card family transcriptional regulator | TPANIC_RS02500 | Not Available | + | 548587 - 549213 | 23790.8 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | TPANIC_RS02505 | Not Available | + | 549210 - 550457 | 44016.1 |
| trk system potassium transporter trka | TPANIC_RS02510 | Not Available | + | 550495 - 551931 | 51104.3 |
| excinuclease abc subunit uvra | TPANIC_RS02515 | Not Available | + | 552045 - 554927 | 106017.0 |
| lps-assembly protein lptd | TPANIC_RS02520 | Not Available | + | 554924 - 557899 | 112479.0 |
| murein biosynthesis integral membrane protein murj | TPANIC_RS02525 | Not Available | - | 557913 - 559493 | 58055.7 |
| crossover junction endodeoxyribonuclease ruvc | TPANIC_RS02530 | Not Available | - | 559490 - 560080 | 20943.4 |
| thiamine diphosphokinase | TPANIC_RS02535 | Not Available | - | 560062 - 560754 | 25568.4 |
| sigma-54-dependent transcriptional regulator | TPANIC_RS02540 | Not Available | - | 560751 - 562127 | 50965.9 |
| atp-binding protein | TPANIC_RS05600 | Not Available | - | 562137 - 562493 | 12921.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
