Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
268173 bp
Thymine Count
269822 bp
Guanine Count
302933 bp
Cytosine Count
298660 bp
Genome Length
1139633 bp
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | TPANIC_RS02450 | Not Available | + | 539954 - 540517 | 21410.9 |
| hexokinase family protein | TPANIC_RS02455 | Not Available | - | 540648 - 541982 | 47847.5 |
| Trna-lys | Not Available | Not Available | + | 542342 - 542414 | Not Available |
| Trna-leu | Not Available | Not Available | + | 542474 - 542554 | Not Available |
| Trna-gly | Not Available | Not Available | + | 542565 - 542636 | Not Available |
| trigger factor | TPANIC_RS02475 | Not Available | + | 542717 - 544045 | 49941.5 |
| atp-dependent clp protease proteolytic subunit | TPANIC_RS02480 | Not Available | + | 544038 - 544649 | 22346.9 |
| atp-dependent clp protease atp-binding subunit clpx | TPANIC_RS02485 | Not Available | + | 544636 - 545883 | 45480.6 |
| redoxin domain-containing protein | TPANIC_RS02490 | Not Available | + | 545980 - 546546 | 20710.0 |
| translation elongation factor 4 | TPANIC_RS02495 | Not Available | - | 546727 - 548544 | 67626.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
