Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
268173 bp
Thymine Count
269822 bp
Guanine Count
302933 bp
Cytosine Count
298660 bp
Genome Length
1139633 bp
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpod | TPANIC_RS02405 | Not Available | + | 529477 - 531312 | 70906.6 |
| zinc ribbon domain-containing protein | TPANIC_RS02410 | Not Available | + | 531322 - 532143 | 31435.1 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | + | 532164 - 532506 | Not Available |
| tetratricopeptide repeat protein | TPANIC_RS02415 | Not Available | + | 532587 - 533462 | 33384.0 |
| rod shape-determining protein | TPANIC_RS02420 | Not Available | + | 533475 - 534509 | 37060.3 |
| rod shape-determining protein mrec | TPANIC_RS02425 | Not Available | + | 534514 - 535377 | 32336.1 |
| rod shape-determining protein mred | TPANIC_RS02430 | Not Available | + | 535374 - 535880 | 18818.8 |
| penicillin-binding protein 2 | TPANIC_RS02435 | Not Available | + | 535881 - 537755 | 71411.2 |
| rod shape-determining protein roda | TPANIC_RS02440 | Not Available | + | 537752 - 539053 | 48347.8 |
| ankyrin repeat domain-containing protein | TPANIC_RS02445 | Not Available | + | 539079 - 539975 | 32804.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
