Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | TPANIC_RS02160 | Not Available | + | 471034 - 471888 | 33042.6 |
| m23 family metallopeptidase | TPANIC_RS02165 | Not Available | + | 472020 - 472922 | 32115.8 |
| dj-1/pfpi family protein | TPANIC_RS02170 | Not Available | + | 473058 - 473687 | 22046.7 |
| (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | TPANIC_RS02175 | Not Available | + | 473729 - 474943 | 43736.3 |
| hypothetical protein | TPANIC_RS02180 | Not Available | + | 474940 - 476064 | 43129.6 |
| uracil phosphoribosyltransferase | TPANIC_RS02185 | Not Available | + | 476122 - 477204 | 41020.0 |
| tetratricopeptide repeat protein | TPANIC_RS02190 | Not Available | + | 477208 - 477798 | 22570.8 |
| elongation factor g | TPANIC_RS02195 | Not Available | + | 477935 - 479986 | 75806.5 |
| hypothetical protein | TPANIC_RS05285 | Not Available | - | 479975 - 480157 | 6625.21 |
| isoleucine--trna ligase | TPANIC_RS02205 | Not Available | + | 480436 - 483711 | 124249.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
