Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
268173 bp
Thymine Count
269822 bp
Guanine Count
302933 bp
Cytosine Count
298660 bp
Genome Length
1139633 bp
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secd | TPANIC_RS02005 | Not Available | + | 436618 - 438369 | 63864.2 |
| protein translocase subunit secf | TPANIC_RS02010 | Not Available | + | 438366 - 439628 | 45733.9 |
| pur family dna/rna-binding protein | TPANIC_RS02015 | Not Available | - | 439704 - 440009 | 11930.3 |
| phosphoglucomutase | TPANIC_RS02020 | Not Available | - | 440028 - 441926 | 70067.6 |
| alanine/glycine:cation symporter family protein | TPANIC_RS02025 | Not Available | + | 441984 - 443384 | 48726.3 |
| signal recognition particle protein | TPANIC_RS02035 | Not Available | - | 443846 - 445204 | 49260.6 |
| apolipoprotein n-acyltransferase | TPANIC_RS02040 | Not Available | - | 445197 - 446876 | 61255.5 |
| galactokinase | TPANIC_RS02045 | Not Available | + | 446903 - 448096 | 45257.8 |
| 5'/3'-nucleotidase sure | TPANIC_RS02050 | Not Available | + | 448093 - 448863 | 27091.4 |
| tetratricopeptide repeat protein | TPANIC_RS02055 | Not Available | + | 449015 - 451048 | 73850.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
