Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flagellar assembly protein flih | TPANIC_RS01960 | Not Available | + | 427238 - 428167 | 35341.2 |
| flagellar protein export atpase flii | TPANIC_RS01965 | Not Available | + | 428195 - 429538 | 47855.0 |
| flagellar export protein flij | TPANIC_RS01970 | Not Available | + | 429567 - 430019 | 17541.2 |
| mbl fold metallo-hydrolase | TPANIC_RS01975 | Not Available | - | 430016 - 430549 | 19492.0 |
| pentapeptide repeat-containing protein | TPANIC_RS01980 | Not Available | - | 430546 - 430980 | 16531.5 |
| glutamate racemase | TPANIC_RS01985 | Not Available | + | 431003 - 431992 | 36225.2 |
| had family hydrolase | TPANIC_RS01990 | Not Available | + | 432096 - 432776 | 25991.9 |
| spirococo family coiled-coil protein | TPANIC_RS01995 | Not Available | + | 432872 - 436126 | 124022.0 |
| hypothetical protein | TPANIC_RS05590 | Not Available | + | 436168 - 436353 | 7158.53 |
| preprotein translocase subunit yajc | TPANIC_RS02000 | Not Available | + | 436292 - 436621 | 11866.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
