Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| site-specific tyrosine recombinase | TPANIC_RS01910 | Not Available | + | 417165 - 418085 | 34345.2 |
| tetratricopeptide repeat protein | TPANIC_RS01915 | Not Available | + | 418102 - 418827 | 27752.3 |
| dna-processing protein dpra | TPANIC_RS01920 | Not Available | + | 418824 - 419732 | 33107.1 |
| type i dna topoisomerase | TPANIC_RS01925 | Not Available | + | 419765 - 421960 | 82445.8 |
| tyrosine recombinase xerc | TPANIC_RS01930 | Not Available | + | 421953 - 422846 | 33967.1 |
| flagellar basal body rod protein flgb | TPANIC_RS01935 | Not Available | + | 422994 - 423404 | 15646.6 |
| flagellar basal body rod protein flgc | TPANIC_RS01940 | Not Available | + | 423422 - 423877 | 16376.5 |
| flagellar hook-basal body complex protein flie | TPANIC_RS01945 | Not Available | + | 423933 - 424307 | 13703.5 |
| flagellar basal-body ms-ring/collar protein flif | TPANIC_RS01950 | Not Available | + | 424424 - 426127 | 64642.7 |
| flagellar motor switch protein flig | TPANIC_RS01955 | Not Available | + | 426132 - 427190 | 39823.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
