Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | TPANIC_RS01570 | Not Available | + | 337283 - 338884 | 58036.8 |
| abc transporter permease | TPANIC_RS01575 | Not Available | + | 338950 - 339996 | 36662.9 |
| abc transporter permease | TPANIC_RS01580 | Not Available | + | 339993 - 340943 | 33826.7 |
| translocation/assembly module tamb domain-containing protein | TPANIC_RS01585 | Not Available | + | 341047 - 345453 | 161347.0 |
| outer membrane protein assembly factor bama | TPANIC_RS01590 | Not Available | + | 345483 - 347996 | 94271.5 |
| omph family outer membrane protein | TPANIC_RS01595 | Not Available | + | 348053 - 348571 | 19716.7 |
| dna mismatch repair protein muts | TPANIC_RS01600 | Not Available | + | 348627 - 351329 | 99710.8 |
| glycine hydroxymethyltransferase | TPANIC_RS05245 | Not Available | + | 351447 - 352988 | 55813.8 |
| Trna-leu | Not Available | Not Available | + | 352970 - 353052 | Not Available |
| atp-binding protein | TPANIC_RS01615 | Not Available | - | 353144 - 354940 | 67760.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
