Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s16 | TPANIC_RS05560 | Not Available | + | 159543 - 159737 | 7335.86 |
| hypothetical protein | TPANIC_RS00700 | Not Available | - | 159684 - 160421 | 26966.4 |
| potassium channel family protein | TPANIC_RS00705 | Not Available | - | 160429 - 161121 | 25324.8 |
| trkh family potassium uptake protein | TPANIC_RS00710 | Not Available | - | 161161 - 162879 | 61969.0 |
| methylated-dna--[protein]-cysteine s-methyltransferase | TPANIC_RS00715 | Not Available | + | 163060 - 163593 | 19379.7 |
| abc transporter atp-binding protein | TPANIC_RS00720 | Not Available | - | 163544 - 164206 | 24067.2 |
| abc transporter permease | TPANIC_RS00725 | Not Available | - | 164199 - 165941 | 63472.6 |
| thiamine abc transporter substrate binding subunit | TPANIC_RS00730 | Not Available | - | 165938 - 166945 | 36815.0 |
| amp-dependent synthetase/ligase | TPANIC_RS00735 | Not Available | + | 167055 - 169025 | 72227.4 |
| Trna-leu | Not Available | Not Available | + | 169100 - 169181 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
