Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | TPANIC_RS05005 | Not Available | - | 1106077 - 1108011 | 71130.9 |
| transcription antitermination factor nusb | TPANIC_RS05010 | Not Available | - | 1107977 - 1108402 | 16015.3 |
| peptidyl-prolyl cis-trans isomerase | TPANIC_RS05015 | Not Available | - | 1108399 - 1109484 | 39938.2 |
| alanine--trna ligase | TPANIC_RS05020 | Not Available | - | 1109557 - 1111374 | 67191.2 |
| ribonuclease y | TPANIC_RS05030 | Not Available | + | 1111546 - 1113060 | 57074.3 |
| aspartyl/glutamyl-trna amidotransferase subunit c | TPANIC_RS05035 | Not Available | + | 1113181 - 1113525 | 12559.6 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | TPANIC_RS05040 | Not Available | + | 1113526 - 1115046 | 54105.2 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | TPANIC_RS05045 | Not Available | + | 1115039 - 1116568 | 56868.2 |
| dna repair protein rada | TPANIC_RS05050 | Not Available | - | 1116664 - 1118031 | 49307.6 |
| recombination regulator recx | TPANIC_RS05055 | Not Available | - | 1118078 - 1118572 | 18874.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
