Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cysteine--trna ligase | TPANIC_RS00445 | Not Available | + | 100001 - 101563 | 58406.2 |
| rna polymerase sigma factor | TPANIC_RS00450 | Not Available | + | 101580 - 102122 | 21152.5 |
| anti-sigma factor family protein | TPANIC_RS00455 | Not Available | + | 102145 - 102753 | 22003.9 |
| phosphate acetyltransferase | TPANIC_RS00460 | Not Available | + | 102891 - 103901 | 36540.0 |
| tetratricopeptide repeat protein | TPANIC_RS00465 | Not Available | + | 103901 - 105847 | 72383.7 |
| trar/dksa family transcriptional regulator | TPANIC_RS00470 | Not Available | - | 105921 - 106283 | 13581.2 |
| translation initiation factor if-1 | TPANIC_RS00475 | Not Available | + | 106453 - 106671 | 8288.13 |
| j domain-containing protein | TPANIC_RS00480 | Not Available | - | 106724 - 107380 | 23675.6 |
| ump kinase | TPANIC_RS00485 | Not Available | - | 107384 - 108139 | 27300.5 |
| tlpa family protein disulfide reductase | TPANIC_RS00490 | Not Available | + | 108334 - 108936 | 22010.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
