Salegentibacter holothuriorum

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Salegentibacter

Description

Salegentibacter holothuriorum is a Gram-negative, rod-shaped bacterium that exhibits aerobic respiration and is characterized by its non-spore-forming nature. This microorganism thrives optimally at a temperature of 16.0°C, suggesting a preference for cooler aquatic environments. The Gram-negative classification indicates that S. holothuriorum possesses a thin peptidoglycan layer surrounded by an outer membrane, which may contribute to its adaptability in various environmental conditions. The aerobic requirement of S. holothuriorum highlights its dependence on oxygen for metabolic processes, which is typical for many marine bacteria. This trait may influence its distribution in marine ecosystems and its interactions with other microbial communities. Given its optimal growth temperature, S. holothuriorum may play a significant role in nutrient cycling within cold-water habitats, such as deep-sea environments or temperate coastal regions. The presence of S. holothuriorum in these ecosystems could also imply its potential involvement in the degradation of organic matter, contributing to the overall health and stability of marine ecosystems. Its adaptation to specific temperature and oxygen conditions may reflect a broader ecological niche that warrants further exploration to understand its role in marine microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusSalegentibacter
SpeciesSalegentibacter holothuriorum
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salegentibacter holothuriorum

Accession NumberFUYY00000000.1

Gene Summary

Adenine Count

1141072 bp

Thymine Count

1143969 bp

Guanine Count

654505 bp

Cytosine Count

652449 bp

Genome Length

3591995 bp

Protein-coding Genes

3079 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
ferredoxinSAMN05660776_0276Not Available+104043 - 1042738340.35
septum formation proteinSAMN05660776_0277Not Available-104300 - 10488421959.3
4-hydroxybenzoate polyprenyltransferaseSAMN05660776_0278Not Available-104891 - 10580234305.4
quaternary ammonium compound-resistance protein sugeSAMN05660776_0279Not Available-105811 - 10613711847.0
3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase)SAMN05660776_0280Not Available-106137 - 10664919071.0
nadp oxidoreductase coenzyme f420-dependentSAMN05660776_0281Not Available-106633 - 10739428278.1
cytochrome c-type biogenesis protein ccsbSAMN05660776_0282Not Available+107517 - 110705120855.0
fumarase, class iiSAMN05660776_0283Not Available-110877 - 11227450442.4
hypothetical proteinSAMN05660776_0284Not Available+112551 - 1127276791.62
outer membrane receptor proteins, mostly fe transportSAMN05660776_0285Not Available-112804 - 11532995440.2

Displaying genes 101 – 110 of 3121 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites