Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Nostocaceae
Genus
Trichormus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Nostocaceae |
| Genus | Trichormus |
| Species | Trichormus variabilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Filamentous |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments - Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Trichormus variabilis ATCC 29413
Accession NumberNC_007411.1
Gene Summary
Adenine Count
10782 bp
Thymine Count
11212 bp
Guanine Count
6936 bp
Cytosine Count
6832 bp
Genome Length
35762 bp
Protein-coding Genes
33 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hybrid sensor histidine kinase/response regulator | AVA_RS23865 | Not Available | + | 5878222 - 5879367 | 42599.9 |
| hypothetical protein | AVA_RS23870 | Not Available | - | 5879543 - 5880304 | 28522.6 |
| aaa family atpase | AVA_RS23875 | Not Available | - | 5880304 - 5881686 | 52195.9 |
| zinc ribbon domain-containing protein | AVA_RS23880 | Not Available | - | 5881919 - 5882290 | 13769.6 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | AVA_RS23885 | Not Available | + | 5882503 - 5884266 | 66000.2 |
| hypothetical protein | AVA_RS23890 | Not Available | - | 5884369 - 5884701 | 13186.0 |
| alpha/beta fold hydrolase | AVA_RS23895 | Not Available | - | 5885018 - 5885905 | 32220.3 |
| carbon dioxide-concentrating mechanism protein ccmk | AVA_RS23900 | Not Available | + | 5886121 - 5886432 | 10998.3 |
| carbon dioxide-concentrating mechanism protein ccmk | AVA_RS23905 | Not Available | + | 5886521 - 5886874 | 12374.8 |
| nil domain-containing protein | AVA_RS23910 | Not Available | - | 5887061 - 5887327 | 9804.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.