Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Nostocaceae
Genus
Trichormus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Nostocaceae |
| Genus | Trichormus |
| Species | Trichormus variabilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Filamentous |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments - Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Trichormus variabilis ATCC 29413
Accession NumberNC_007411.1
Gene Summary
Adenine Count
10782 bp
Thymine Count
11212 bp
Guanine Count
6936 bp
Cytosine Count
6832 bp
Genome Length
35762 bp
Protein-coding Genes
33 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hormogonium polysaccharide biosynthesis protein hpsa | AVA_RS01315 | Not Available | + | 337530 - 342569 | 182756.0 |
| hormogonium polysaccharide secretion pseudopilin hpsb | AVA_RS01320 | Not Available | + | 342733 - 343419 | 23913.6 |
| hormogonium polysaccharide secretion pseudopilin hpsc | AVA_RS01325 | Not Available | + | 343463 - 344443 | 35202.8 |
| type iv pilin protein | AVA_RS01330 | Not Available | + | 344482 - 345159 | 24575.8 |
| hormogonium polysaccharide biosynthesis glycosyltransferase hpse | AVA_RS01335 | Not Available | + | 345546 - 346517 | 37244.7 |
| hormogonium polysaccharide biosynthesis glycosyltransferase hpse | AVA_RS01340 | Not Available | + | 346535 - 347542 | 38970.0 |
| glycosyltransferase family 2 protein | AVA_RS01345 | Not Available | + | 347535 - 348536 | 37916.8 |
| type ii secretion system protein | AVA_RS01350 | Not Available | + | 348559 - 349116 | 21112.3 |
| tigr04282 family arsenosugar biosynthesis glycosyltransferase | AVA_RS01355 | Not Available | + | 349149 - 349799 | 24427.6 |
| hpsj family protein | AVA_RS01360 | Not Available | + | 350049 - 350891 | 31043.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.