Trichormus variabilis ATCC 29413

Gram-negativeFilamentousMotileAerobe

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Nostocaceae

Genus

Trichormus

Description

Trichormus variabilis ATCC 29413 is a filamentous, Gram-negative bacterium characterized by its unique cell arrangement, which consists of single filaments. This microbe is classified as a heterotroph, indicating that it derives its energy from organic compounds rather than photosynthesis or inorganic sources. T. variabilis thrives in diverse habitats, suggesting a broad ecological adaptability that allows it to occupy various niches in the environment. As an obligate aerobe, it requires oxygen for growth, which indicates its metabolic pathways are likely optimized for aerobic respiration. The filamentous structure of T. variabilis may confer advantages in its ecological interactions, potentially allowing for efficient nutrient acquisition and colonization within its habitat. Additionally, the presence of this organism in multiple environments underscores its versatility and may play a role in biogeochemical cycling processes. Understanding the ecological roles of such filamentous bacteria can provide insights into their contributions to nutrient dynamics and microbial community structures in various ecosystems.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyNostocaceae
GenusTrichormus
SpeciesTrichormus variabilis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeFilamentous
MobilityYes
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementFilaments - Singles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Trichormus variabilis ATCC 29413

Accession NumberNC_007411.1

Gene Summary

Adenine Count

10782 bp

Thymine Count

11212 bp

Guanine Count

6936 bp

Cytosine Count

6832 bp

Genome Length

35762 bp

Protein-coding Genes

33 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
mfs transporterAVA_RS01215Not Available+316078 - 31727142435.2
hypothetical proteinAVA_RS01220Not Available-317336 - 31759910417.2
hypothetical proteinAVA_RS01225Not Available-317596 - 3178268653.23
aspartate--trna ligaseAVA_RS01230Not Available-317926 - 31971367884.0
type ii toxin-antitoxin system hicb family antitoxinAVA_RS01235Not Available-319875 - 3200697151.49
type ii toxin-antitoxin system hicb family antitoxinAVA_RS01240Not Available-320120 - 3203509017.56
type ii toxin-antitoxin system hica family toxinAVA_RS01245Not Available-320347 - 3205869060.82
dynamin-like gtpase family proteinAVA_RS01250Not Available-321106 - 32356593189.4
ribokinaseAVA_RS01255Not Available+323773 - 32469631508.0
duf4360 domain-containing proteinAVA_RS01260Not Available+324795 - 32540021801.9

Displaying genes 961 – 970 of 5988 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0002833FMNH2C17H21N4O9PChemical structure of FMNH25666-16-0
Average456.3438Da
Monoisotopic456.1046148Da

Displaying 1–1 of 1 metabolites