Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Nostocaceae
Genus
Trichormus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Nostocaceae |
| Genus | Trichormus |
| Species | Trichormus variabilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Filamentous |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments - Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Trichormus variabilis ATCC 29413
Accession NumberNC_007411.1
Gene Summary
Adenine Count
10782 bp
Thymine Count
11212 bp
Guanine Count
6936 bp
Cytosine Count
6832 bp
Genome Length
35762 bp
Protein-coding Genes
33 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | AVA_RS01215 | Not Available | + | 316078 - 317271 | 42435.2 |
| hypothetical protein | AVA_RS01220 | Not Available | - | 317336 - 317599 | 10417.2 |
| hypothetical protein | AVA_RS01225 | Not Available | - | 317596 - 317826 | 8653.23 |
| aspartate--trna ligase | AVA_RS01230 | Not Available | - | 317926 - 319713 | 67884.0 |
| type ii toxin-antitoxin system hicb family antitoxin | AVA_RS01235 | Not Available | - | 319875 - 320069 | 7151.49 |
| type ii toxin-antitoxin system hicb family antitoxin | AVA_RS01240 | Not Available | - | 320120 - 320350 | 9017.56 |
| type ii toxin-antitoxin system hica family toxin | AVA_RS01245 | Not Available | - | 320347 - 320586 | 9060.82 |
| dynamin-like gtpase family protein | AVA_RS01250 | Not Available | - | 321106 - 323565 | 93189.4 |
| ribokinase | AVA_RS01255 | Not Available | + | 323773 - 324696 | 31508.0 |
| duf4360 domain-containing protein | AVA_RS01260 | Not Available | + | 324795 - 325400 | 21801.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.