Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Nostocaceae
Genus
Trichormus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Nostocaceae |
| Genus | Trichormus |
| Species | Trichormus variabilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Filamentous |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments - Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Trichormus variabilis ATCC 29413
Accession NumberNC_007411.1
Gene Summary
Adenine Count
10782 bp
Thymine Count
11212 bp
Guanine Count
6936 bp
Cytosine Count
6832 bp
Genome Length
35762 bp
Protein-coding Genes
33 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AVA_RS30225 | Not Available | + | 163283 - 163438 | 5697.88 |
| eal domain-containing protein | AVA_RS00620 | Not Available | + | 163484 - 165319 | 69956.2 |
| response regulator | AVA_RS00625 | Not Available | + | 165708 - 167120 | 52641.6 |
| circadian clock protein ldpa | AVA_RS00630 | Not Available | + | 167223 - 168374 | 41631.3 |
| r3h domain-containing nucleic acid-binding protein | AVA_RS00635 | Not Available | + | 168414 - 170153 | 64382.2 |
| agmatinase speb | AVA_RS00640 | Not Available | + | 170245 - 171285 | 38507.8 |
| rna recognition motif domain-containing protein | AVA_RS00645 | Not Available | + | 171705 - 172016 | 11103.9 |
| is630-like element isava6 family transposase | AVA_RS00650 | Not Available | - | 172215 - 173285 | 41145.3 |
| m48 family metallopeptidase | AVA_RS00655 | Not Available | + | 173505 - 175091 | 58796.6 |
| cop23 domain-containing protein | AVA_RS00660 | Not Available | + | 175324 - 176103 | 28304.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.