Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Nostocaceae
Genus
Trichormus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Nostocaceae |
| Genus | Trichormus |
| Species | Trichormus variabilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Filamentous |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments - Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Trichormus variabilis ATCC 29413
Accession NumberNC_007411.1
Gene Summary
Adenine Count
10782 bp
Thymine Count
11212 bp
Guanine Count
6936 bp
Cytosine Count
6832 bp
Genome Length
35762 bp
Protein-coding Genes
33 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bama/tama family outer membrane protein | AVA_RS00470 | Not Available | + | 126211 - 128727 | 90163.1 |
| udp-3-o-acyl-n-acetylglucosamine deacetylase | AVA_RS00475 | Not Available | + | 128861 - 129703 | 30194.9 |
| 3-hydroxyacyl-acp dehydratase fabz | AVA_RS00480 | Not Available | + | 129780 - 130295 | 18989.2 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | AVA_RS00485 | Not Available | + | 130544 - 131362 | 29497.0 |
| lipid-a-disaccharide synthase | AVA_RS00490 | Not Available | + | 131492 - 132646 | 42317.0 |
| type ii toxin-antitoxin system hicb family antitoxin | AVA_RS00495 | Not Available | - | 132913 - 133137 | 8411.9 |
| uma2 family endonuclease | AVA_RS00500 | Not Available | - | 133254 - 133838 | 22199.3 |
| dna cytosine methyltransferase | AVA_RS00505 | Not Available | + | 134074 - 135369 | 48731.6 |
| cmcj/nvfi family oxidoreductase | AVA_RS00510 | Not Available | - | 135499 - 136359 | 32644.3 |
| nad(p)-binding domain-containing protein | AVA_RS00515 | Not Available | - | 136399 - 137841 | 53234.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.