Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Nostocaceae
Genus
Trichormus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Nostocaceae |
| Genus | Trichormus |
| Species | Trichormus variabilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Filamentous |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments - Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Trichormus variabilis ATCC 29413
Accession NumberNC_007411.1
Gene Summary
Adenine Count
10782 bp
Thymine Count
11212 bp
Guanine Count
6936 bp
Cytosine Count
6832 bp
Genome Length
35762 bp
Protein-coding Genes
33 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mase1 domain-containing protein | AVA_RS25000 | Not Available | - | 6196882 - 6199539 | 98372.9 |
| m23 family metallopeptidase | AVA_RS25005 | Not Available | + | 6199978 - 6200916 | 33956.6 |
| late competence development comfb family protein | AVA_RS25010 | Not Available | + | 6201045 - 6201584 | 19635.3 |
| l,d-transpeptidase | AVA_RS25015 | Not Available | - | 6201655 - 6202473 | 29752.4 |
| hypothetical protein | AVA_RS30725 | Not Available | + | 6202704 - 6202898 | 7169.75 |
| sigma-70 family rna polymerase sigma factor | AVA_RS25020 | Not Available | + | 6203699 - 6204355 | 25217.9 |
| anti-sigma factor family protein | AVA_RS25025 | Not Available | + | 6204511 - 6205116 | 22325.8 |
| gamma-glutamylcyclotransferase | AVA_RS25030 | Not Available | - | 6205113 - 6205580 | 17536.0 |
| leucine--trna ligase | AVA_RS25035 | Not Available | + | 6205668 - 6208286 | 98517.8 |
| nucleoside deaminase | AVA_RS25040 | Not Available | - | 6208464 - 6208895 | 15764.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.