Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Nostocaceae
Genus
Trichormus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Nostocaceae |
| Genus | Trichormus |
| Species | Trichormus variabilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Filamentous |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments - Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Trichormus variabilis ATCC 29413
Accession NumberNC_007411.1
Gene Summary
Adenine Count
10782 bp
Thymine Count
11212 bp
Guanine Count
6936 bp
Cytosine Count
6832 bp
Genome Length
35762 bp
Protein-coding Genes
33 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tubulin-like doman-containing protein | AVA_RS24010 | Not Available | - | 5931587 - 5934319 | 103544.0 |
| vwa domain-containing protein | AVA_RS24015 | Not Available | - | 5934340 - 5936070 | 63167.1 |
| helix-turn-helix domain-containing protein | AVA_RS24020 | Not Available | - | 5936226 - 5936474 | 9364.51 |
| efflux rnd transporter permease subunit | AVA_RS24025 | Not Available | - | 5937017 - 5940106 | 112382.0 |
| efflux rnd transporter periplasmic adaptor subunit | AVA_RS24030 | Not Available | - | 5940320 - 5941852 | 55472.2 |
| pep-cterm sorting domain-containing protein | AVA_RS24035 | Not Available | - | 5941950 - 5942933 | 35341.6 |
| pep-cterm sorting domain-containing protein | AVA_RS24040 | Not Available | - | 5943185 - 5944168 | 35283.3 |
| pep-cterm sorting domain-containing protein | AVA_RS24045 | Not Available | - | 5944423 - 5945172 | 26916.0 |
| helix-turn-helix domain-containing protein | AVA_RS24050 | Not Available | + | 5946354 - 5947187 | 32132.1 |
| acyl carrier protein | AVA_RS24055 | Not Available | + | 5947324 - 5947581 | 9849.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.