Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Nostocaceae
Genus
Trichormus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Nostocaceae |
| Genus | Trichormus |
| Species | Trichormus variabilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Filamentous |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments - Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Trichormus variabilis ATCC 29413
Accession NumberNC_007411.1
Gene Summary
Adenine Count
10782 bp
Thymine Count
11212 bp
Guanine Count
6936 bp
Cytosine Count
6832 bp
Genome Length
35762 bp
Protein-coding Genes
33 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein | AVA_RS22785 | Not Available | + | 5618530 - 5619381 | 30524.1 |
| photosystem ii reaction center protein psbm | AVA_RS29890 | Not Available | - | 5619581 - 5619697 | 4213.25 |
| 2fe-2s iron-sulfur cluster-binding protein | AVA_RS22790 | Not Available | - | 5619797 - 5620093 | 10590.0 |
| photosystem ii reaction center protein k | AVA_RS22795 | Not Available | - | 5620256 - 5620393 | 5060.43 |
| atp-binding sensor histidine kinase | AVA_RS22800 | Not Available | - | 5620671 - 5626223 | 209170.0 |
| duf4126 domain-containing protein | AVA_RS22805 | Not Available | - | 5626516 - 5627055 | 19625.7 |
| ribose-5-phosphate isomerase rpia | AVA_RS22810 | Not Available | - | 5627500 - 5628210 | 24932.3 |
| tetratricopeptide repeat protein | AVA_RS22815 | Not Available | - | 5628517 - 5630334 | 68922.5 |
| hypothetical protein | AVA_RS22820 | Not Available | + | 5630591 - 5630818 | 8520.24 |
| duf6335 family protein | AVA_RS22825 | Not Available | - | 5631060 - 5631482 | 15785.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.