Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Nostocaceae
Genus
Trichormus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Nostocaceae |
| Genus | Trichormus |
| Species | Trichormus variabilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Filamentous |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments - Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Trichormus variabilis ATCC 29413
Accession NumberNC_007411.1
Gene Summary
Adenine Count
10782 bp
Thymine Count
11212 bp
Guanine Count
6936 bp
Cytosine Count
6832 bp
Genome Length
35762 bp
Protein-coding Genes
33 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| saccharopine dehydrogenase family protein | AVA_RS22315 | Not Available | + | 5505722 - 5506828 | 40600.8 |
| hypothetical protein | AVA_RS22320 | Not Available | + | 5507619 - 5508203 | 22533.5 |
| n-acetylmuramoyl-l-alanine amidase | AVA_RS22325 | Not Available | - | 5508284 - 5509225 | 34372.4 |
| prephenate/arogenate dehydrogenase | AVA_RS22330 | Not Available | - | 5509704 - 5510549 | 30269.2 |
| pentapeptide repeat-containing protein | AVA_RS22335 | Not Available | + | 5510609 - 5512174 | 56400.8 |
| duf1517 domain-containing protein | AVA_RS22340 | Not Available | + | 5512413 - 5512994 | 21822.8 |
| hypothetical protein | AVA_RS22345 | Not Available | + | 5513198 - 5514070 | 31379.6 |
| pas domain s-box protein | AVA_RS22350 | Not Available | - | 5514154 - 5516079 | 71949.5 |
| hypothetical protein | AVA_RS22355 | Not Available | + | 5516586 - 5519129 | 94645.9 |
| virulence factor srfb | AVA_RS22360 | Not Available | + | 5519179 - 5522568 | 128444.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.