Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Nostocaceae
Genus
Trichormus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Nostocaceae |
| Genus | Trichormus |
| Species | Trichormus variabilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Filamentous |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments - Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Trichormus variabilis ATCC 29413
Accession NumberNC_007411.1
Gene Summary
Adenine Count
10782 bp
Thymine Count
11212 bp
Guanine Count
6936 bp
Cytosine Count
6832 bp
Genome Length
35762 bp
Protein-coding Genes
33 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AVA_RS22215 | Not Available | + | 5482353 - 5482589 | 8200.49 |
| hypothetical protein | AVA_RS22220 | Not Available | + | 5482703 - 5482939 | 8200.49 |
| hypothetical protein | AVA_RS22225 | Not Available | + | 5483049 - 5483285 | 8256.57 |
| hypothetical protein | AVA_RS22230 | Not Available | + | 5483702 - 5483923 | 8382.07 |
| phosphotransferase family protein | AVA_RS22235 | Not Available | + | 5484232 - 5485404 | 44640.6 |
| t3ss effector hopa1 family protein | AVA_RS22240 | Not Available | + | 5485630 - 5486712 | 40786.2 |
| hetp family heterocyst commitment protein | AVA_RS29885 | Not Available | + | 5486864 - 5487145 | 10904.4 |
| peptidylprolyl isomerase | AVA_RS22245 | Not Available | - | 5487319 - 5488101 | 29793.5 |
| hlyd family efflux transporter periplasmic adaptor subunit | AVA_RS22250 | Not Available | - | 5488417 - 5489964 | 57951.5 |
| abc transporter transmembrane domain-containing protein | AVA_RS22260 | Not Available | - | 5490234 - 5493269 | 113263.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.