Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Nostocaceae
Genus
Trichormus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Nostocaceae |
| Genus | Trichormus |
| Species | Trichormus variabilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Filamentous |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments - Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Trichormus variabilis ATCC 29413
Accession NumberNC_007411.1
Gene Summary
Adenine Count
10782 bp
Thymine Count
11212 bp
Guanine Count
6936 bp
Cytosine Count
6832 bp
Genome Length
35762 bp
Protein-coding Genes
33 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | AVA_RS21835 | Not Available | + | 5392788 - 5393834 | 38918.7 |
| atp-binding protein | AVA_RS21840 | Not Available | + | 5393831 - 5395615 | 67324.6 |
| hypothetical protein | AVA_RS21845 | Not Available | - | 5395752 - 5396072 | 12134.6 |
| pentapeptide repeat-containing protein | AVA_RS21850 | Not Available | + | 5396660 - 5397208 | 19546.6 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | AVA_RS21855 | Not Available | + | 5397205 - 5398347 | 41754.9 |
| Ncrna_class:other | Not Available | Not Available | + | 5398416 - 5398599 | Not Available |
| pitrilysin family protein | AVA_RS21860 | Not Available | + | 5398892 - 5400160 | 47698.6 |
| m16 family metallopeptidase | AVA_RS21865 | Not Available | + | 5400248 - 5401531 | 47058.5 |
| peptidoglycan-binding domain-containing protein | AVA_RS21870 | Not Available | + | 5401937 - 5402746 | 28712.0 |
| phage holin family protein | AVA_RS21875 | Not Available | + | 5402908 - 5403261 | 12424.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.