Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Nostocaceae
Genus
Trichormus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Nostocaceae |
| Genus | Trichormus |
| Species | Trichormus variabilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Filamentous |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments - Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Trichormus variabilis ATCC 29413
Accession NumberNC_007411.1
Gene Summary
Adenine Count
10782 bp
Thymine Count
11212 bp
Guanine Count
6936 bp
Cytosine Count
6832 bp
Genome Length
35762 bp
Protein-coding Genes
33 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AVA_RS21290 | Not Available | + | 5264070 - 5264450 | 14127.0 |
| uma2 family endonuclease | AVA_RS21295 | Not Available | - | 5264463 - 5265059 | 22616.0 |
| universal stress protein | AVA_RS21300 | Not Available | - | 5265109 - 5265534 | 15383.5 |
| histidinol dehydrogenase | AVA_RS21305 | Not Available | - | 5265756 - 5267057 | 46703.9 |
| 30s ribosomal protein s20 | AVA_RS21310 | Not Available | + | 5267786 - 5268079 | 10811.1 |
| tatd family hydrolase | AVA_RS21315 | Not Available | + | 5268159 - 5268944 | 29172.7 |
| hypothetical protein | AVA_RS21320 | Not Available | - | 5269489 - 5269722 | 8347.06 |
| dna-directed rna polymerase subunit beta | AVA_RS21325 | Not Available | + | 5269721 - 5273074 | 124950.0 |
| dna-directed rna polymerase subunit gamma | AVA_RS21330 | Not Available | + | 5273209 - 5275086 | 70588.4 |
| dna-directed rna polymerase subunit beta'' | AVA_RS21335 | Not Available | + | 5275281 - 5279348 | 147524.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.