Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Nostocaceae
Genus
Trichormus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Nostocaceae |
| Genus | Trichormus |
| Species | Trichormus variabilis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Filamentous |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments - Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Trichormus variabilis ATCC 29413
Accession NumberNC_007411.1
Gene Summary
Adenine Count
10782 bp
Thymine Count
11212 bp
Guanine Count
6936 bp
Cytosine Count
6832 bp
Genome Length
35762 bp
Protein-coding Genes
33 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | AVA_RS01980 | Not Available | - | 508594 - 509940 | 50565.9 |
| tmem14 family protein | AVA_RS01985 | Not Available | + | 510047 - 510367 | 11201.5 |
| phosphotransferase family protein | AVA_RS01990 | Not Available | + | 511486 - 512721 | 46854.6 |
| t3ss effector hopa1 family protein | AVA_RS01995 | Not Available | + | 512869 - 513957 | 40993.5 |
| acyl-coa thioesterase | AVA_RS02000 | Not Available | + | 514033 - 514479 | 16943.3 |
| hit family protein | AVA_RS02005 | Not Available | - | 514535 - 515389 | 33054.8 |
| ydcf family protein | AVA_RS02010 | Not Available | + | 515470 - 516261 | 28915.6 |
| hypothetical protein | AVA_RS02015 | Not Available | + | 516377 - 516598 | 9101.56 |
| ferredoxin-thioredoxin reductase variable chain | AVA_RS02020 | Not Available | - | 516613 - 516876 | 9921.15 |
| pp2c family protein-serine/threonine phosphatase | AVA_RS02025 | Not Available | - | 517237 - 519180 | 72312.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.