Akkermansia muciniphila str. EB-AMDK-15

Gram-negativeCocciNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Verrucomicrobiota

Class

Verrucomicrobiia

Order

Verrucomicrobiales

Family

Akkermansiaceae

Genus

Akkermansia

Description

Akkermansia muciniphila str. EB-AMDK-15 is a Gram-negative, anaerobic cocci that typically exists in host-associated environments, thriving optimally at a temperature of 37.0°C. This strain is characterized by its unique cellular arrangement, where cells predominantly form pairs and can also be observed as singles. As a member of the Akkermansia genus, this strain is known to inhabit mucosal surfaces, suggesting a specialized role in the microbiota of its host. Its anaerobic nature indicates an adaptation to environments devoid of oxygen, which is common in the gastrointestinal tract where it can contribute to host health. The ability to persist in such ecological niches may be linked to its metabolic capabilities, particularly in utilizing mucin as a carbon source, thus potentially influencing gut health and homeostasis. The presence of Akkermansia muciniphila, including strain EB-AMDK-15, in the gut microbiome is emerging as a significant aspect of microbial ecology, with implications for gut barrier function and overall metabolic health. Understanding its specific traits and behaviors could provide insights into the complex interactions within the gastrointestinal microbiota and their impact on host physiology.

Taxonomy

KingdomPseudomonadati
PhylumVerrucomicrobiota
ClassVerrucomicrobiia
OrderVerrucomicrobiales
FamilyAkkermansiaceae
GenusAkkermansia
SpeciesAkkermansia muciniphila
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Akkermansia muciniphila str. EB-AMDK-15
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Akkermansia muciniphila str. EB-AMDK-15

Accession NumberNZ_CP025830.1

Gene Summary

Adenine Count

618989 bp

Thymine Count

619239 bp

Guanine Count

768574 bp

Cytosine Count

763296 bp

Genome Length

2770098 bp

Protein-coding Genes

2326 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hydrogenase small subunitC1O50_RS11420Not Available+2704084 - 270530443978.7
nickel-dependent hydrogenase large subunitC1O50_RS11425Not Available+2705331 - 270708864788.7
cytochrome b/b6 domain-containing proteinC1O50_RS11430Not Available+2707085 - 270825744458.1
hyad/hybd family hydrogenase maturation endopeptidaseC1O50_RS11435Not Available+2708279 - 270882419456.7
hydrogenase maturation nickel metallochaperone hypaC1O50_RS11440Not Available+2708817 - 270915812512.1
hypothetical proteinC1O50_RS11445Not Available+2709283 - 271023034171.0
duf4870 domain-containing proteinC1O50_RS11450Not Available-2710327 - 271072814413.8
hypothetical proteinC1O50_RS11455Not Available+2710915 - 271164626350.3
family 20 glycosylhydrolaseC1O50_RS11460Not Available-2711835 - 271410583749.1
nad(p)h-dependent oxidoreductaseC1O50_RS11465Not Available-2714477 - 271512424409.1

Displaying genes 2331 – 2340 of 2391 in total

Pathways

23 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites