Helicobacter hepaticus ATCC 51449

Gram-negativeSpirillaMotileAerobe

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter hepaticus is responsible for chronic hepatitis and liver cancer in mice. It has also been linked to inflammatory bowel disease in immunocompromised mice. H.hepaticus does not colonize the stomach but inhabits the lower bowel. (HAMAP: HELHP)

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter hepaticus
StrainATCC 51449

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityYes
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Helicobacter hepaticus ATCC 51449

Accession NumberNC_004917.1

Gene Summary

Adenine Count

579214 bp

Thymine Count

573476 bp

Guanine Count

318316 bp

Cytosine Count

328140 bp

Genome Length

1799146 bp

Protein-coding Genes

1797 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
type vi secretion system baseplate subunit tssgHH_RS01210Not Available-235149 - 23614438556.7
type vi secretion system baseplate subunit tssfHH_RS01215Not Available-236141 - 23785665492.7
hypothetical proteinHH_RS01220Not Available-237926 - 23831515221.4
type vi secretion system contractile sheath large subunitHH_RS01225Not Available-238319 - 23979156004.2
type vi secretion system contractile sheath small subunitHH_RS01230Not Available-239839 - 24033618533.3
type vi secretion system lipoprotein tssjHH_RS01235Not Available+240524 - 24106019923.1
type vi secretion system baseplate subunit tsskHH_RS01240Not Available+241053 - 24243252077.5
type ivb secretion system protein icmh/dotuHH_RS01245Not Available+242444 - 24323230160.7
type vi secretion system membrane subunit tssmHH_RS01250Not Available+243237 - 246791138685.0
fha domain-containing proteinHH_RS01255Not Available+246801 - 24778136932.9

Displaying genes 271 – 280 of 1853 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

63 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm0002305(S)-2-ethyl-2-hydroxy-3-oxobutanoateC6H9O4Chemical structure of (S)-2-ethyl-2-hydroxy-3-oxobutanoateNot available
Average145.135Da
Monoisotopic145.0506324Da
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da

Displaying 1–10 of 63 metabolites