Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida ND6
Accession NumberNC_018746.1
Gene Summary
Adenine Count
24912 bp
Thymine Count
24448 bp
Guanine Count
33417 bp
Cytosine Count
34226 bp
Genome Length
117003 bp
Protein-coding Genes
121 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ivb secretion system protein icmh/dotu | YSA_RS01385 | Not Available | + | 183735 - 184604 | 32602.8 |
| hcp family type vi secretion system effector | YSA_RS01390 | Not Available | + | 184737 - 185252 | 18975.1 |
| type vi secretion system vgr family protein | YSA_RS01395 | Not Available | + | 185326 - 187494 | 82215.3 |
| duf4123 domain-containing protein | YSA_RS01400 | Not Available | + | 187491 - 188414 | 34433.2 |
| t6ss effector bth_i2691 family protein | YSA_RS01405 | Not Available | + | 188407 - 191395 | 110024.0 |
| duf6708 domain-containing protein | YSA_RS01410 | Not Available | + | 191398 - 192291 | 34156.1 |
| paar domain-containing protein | YSA_RS01415 | Not Available | + | 192288 - 192545 | 8695.29 |
| iclr family transcriptional regulator | YSA_RS01420 | Not Available | - | 192696 - 193466 | 28750.9 |
| shikimate dehydrogenase family protein | YSA_RS01425 | Not Available | + | 193623 - 194432 | 28176.9 |
| fad-dependent oxidoreductase | YSA_RS01430 | Not Available | + | 194437 - 196170 | 62024.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


