Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida ND6
Accession NumberNC_018746.1
Gene Summary
Adenine Count
24912 bp
Thymine Count
24448 bp
Guanine Count
33417 bp
Cytosine Count
34226 bp
Genome Length
117003 bp
Protein-coding Genes
121 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein tssa | YSA_RS01335 | Not Available | - | 173384 - 174847 | 53434.2 |
| type vi secretion system-associated protein vasi | YSA_RS01340 | Not Available | - | 174835 - 175485 | 23402.0 |
| type vi secretion system contractile sheath small subunit | YSA_RS01345 | Not Available | + | 175812 - 176315 | 18641.3 |
| type vi secretion system contractile sheath large subunit | YSA_RS01350 | Not Available | + | 176333 - 177823 | 55935.1 |
| type vi secretion system baseplate subunit tsse | YSA_RS01355 | Not Available | + | 177820 - 178230 | 15558.6 |
| type vi secretion system baseplate subunit tssf | YSA_RS01360 | Not Available | + | 178234 - 180000 | 66483.7 |
| type vi secretion system baseplate subunit tssg | YSA_RS01365 | Not Available | + | 179964 - 180980 | 38581.3 |
| fha domain-containing protein | YSA_RS01370 | Not Available | + | 180977 - 181546 | 20595.4 |
| type vi secretion system lipoprotein tssj | YSA_RS01375 | Not Available | + | 181543 - 182340 | 29006.6 |
| type vi secretion system baseplate subunit tssk | YSA_RS01380 | Not Available | + | 182396 - 183733 | 49938.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


