Pseudomonas putida ND6

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida ND6 is a Gram-negative, rod-shaped bacterium that typically exists in soil and wastewater environments. This microbe is characterized by its arrangement in single cells, which allows for a versatile adaptive response to varying environmental conditions. As a heterotroph, Pseudomonas putida ND6 derives its energy from organic compounds, enabling it to thrive in nutrient-rich substrates often found in polluted or organic waste environments. The facultative anaerobic nature of Pseudomonas putida ND6 allows it to grow in both aerobic and anaerobic conditions, providing a significant advantage in dynamic habitats where oxygen levels may fluctuate. This adaptability is crucial for survival and metabolic versatility, especially in contaminated sites where it can contribute to the biodegradation of various organic pollutants. With its robust metabolic capabilities, Pseudomonas putida ND6 holds potential for bioremediation applications, where its ability to break down environmental contaminants can be harnessed for ecological restoration. The presence of this bacterium in soil and wastewater highlights its role in nutrient cycling and the maintenance of ecosystem health, particularly in environments impacted by human activities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida ND6
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas putida ND6

Accession NumberNC_018746.1

Gene Summary

Adenine Count

24912 bp

Thymine Count

24448 bp

Guanine Count

33417 bp

Cytosine Count

34226 bp

Genome Length

117003 bp

Protein-coding Genes

121 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinYSA_RS29255Not Available+17798 - 1822315524.3
hypothetical proteinYSA_RS29260Not Available+18223 - 1939540957.1
hypothetical proteinYSA_RS29265Not Available+19388 - 1985517702.7
lytic transglycosylase domain-containing proteinYSA_RS29270Not Available+19852 - 2028016084.3
hypothetical proteinYSA_RS29275Not Available+20277 - 2141942785.0
hypothetical proteinYSA_RS29280Not Available+21400 - 2219128228.0
putative icmo-like type iv secretion system proteinYSA_RS29285Not Available+22206 - 2473791922.8
ycbk family proteinYSA_RS29290Not Available+24734 - 2535423186.8
thiol:disulfide interchange protein dsbgYSA_RS29295Not Available+25342 - 2613628635.6
hypothetical proteinYSA_RS29300Not Available+26219 - 2662014883.8

Displaying genes 5721 – 5730 of 5820 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites