Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas putida ND6
Accession NumberNC_018746.1
Gene Summary
Adenine Count
24912 bp
Thymine Count
24448 bp
Guanine Count
33417 bp
Cytosine Count
34226 bp
Genome Length
117003 bp
Protein-coding Genes
121 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphatase family protein | YSA_RS28580 | Not Available | + | 5954161 - 5954850 | 24929.6 |
| phosphatase pap2 family protein | YSA_RS28585 | Not Available | + | 5954853 - 5955683 | 31465.4 |
| type ivb secretion system protein icmh/dotu | YSA_RS28590 | Not Available | + | 5955908 - 5956756 | 32320.8 |
| type vi secretion system vgr family protein | YSA_RS28595 | Not Available | + | 5956770 - 5958947 | 81985.3 |
| duf4123 domain-containing protein | YSA_RS28600 | Not Available | + | 5958947 - 5959825 | 32402.5 |
| t6ss effector bth_i2691 family protein | YSA_RS28605 | Not Available | + | 5959840 - 5962503 | 97632.0 |
| duf6708 domain-containing protein | YSA_RS28610 | Not Available | + | 5962503 - 5963651 | 43677.1 |
| oprd family porin | YSA_RS28615 | Not Available | - | 5963664 - 5964944 | 47274.5 |
| mfs transporter | YSA_RS28620 | Not Available | - | 5964994 - 5966310 | 48189.2 |
| gamma carbonic anhydrase family protein | YSA_RS28625 | Not Available | - | 5966379 - 5966903 | 18238.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


