Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium degerlachei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Flavobacterium degerlachei
Accession NumberFNMV00000000.1
Gene Summary
Adenine Count
1280026 bp
Thymine Count
1263604 bp
Guanine Count
652409 bp
Cytosine Count
659780 bp
Genome Length
3856409 bp
Protein-coding Genes
3347 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444338_101428 | Not Available | - | 470461 - 470655 | 6874.71 |
| 5-formyltetrahydrofolate cyclo-ligase | SAMN05444338_101429 | Not Available | - | 470683 - 471255 | 22057.7 |
| hypothetical protein | SAMN05444338_101430 | Not Available | - | 471416 - 472384 | 35548.6 |
| excinuclease abc subunit c | SAMN05444338_101431 | Not Available | + | 472511 - 474310 | 69048.1 |
| nte family protein | SAMN05444338_101432 | Not Available | + | 474364 - 476568 | 82677.4 |
| homogentisate 1,2-dioxygenase | SAMN05444338_101433 | Not Available | + | 476750 - 477907 | 44341.8 |
| 4-hydroxyphenylpyruvate dioxygenase | SAMN05444338_101435 | Not Available | + | 478061 - 479221 | 43919.2 |
| protein of unknown function | SAMN05444338_101436 | Not Available | + | 479512 - 480282 | 29511.3 |
| tryptophan 2,3-dioxygenase apoenzyme | SAMN05444338_101437 | Not Available | + | 480282 - 481217 | 37190.2 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN05444338_101438 | Not Available | + | 481243 - 482475 | 46598.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
