Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium degerlachei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Flavobacterium degerlachei
Accession NumberFNMV00000000.1
Gene Summary
Adenine Count
1280026 bp
Thymine Count
1263604 bp
Guanine Count
652409 bp
Cytosine Count
659780 bp
Genome Length
3856409 bp
Protein-coding Genes
3347 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN05444338_1206 | Not Available | - | 3699711 - 3701348 | 57696.1 |
| pyruvate dehydrogenase e1 component alpha subunit | SAMN05444338_1207 | Not Available | - | 3701356 - 3702354 | 37667.3 |
| cytidine deaminase | SAMN05444338_1208 | Not Available | - | 3702500 - 3702982 | 17585.1 |
| hypothetical protein | SAMN05444338_1209 | Not Available | - | 3703057 - 3704253 | 44255.2 |
| peptidase family c25 | SAMN05444338_12010 | Not Available | - | 3704293 - 3708123 | 143299.0 |
| hypothetical protein | SAMN05444338_12011 | Not Available | + | 3708172 - 3708285 | 4494.64 |
| protein involved in gliding motility gldj | SAMN05444338_12012 | Not Available | + | 3708335 - 3710020 | 63891.7 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | SAMN05444338_12013 | Not Available | + | 3710088 - 3711377 | 47827.0 |
| regulatory protein, luxr family | SAMN05444338_12014 | Not Available | - | 3711442 - 3714318 | 110766.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444338_12015 | Not Available | + | 3714656 - 3717763 | 111651.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
