Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium degerlachei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Flavobacterium degerlachei
Accession NumberFNMV00000000.1
Gene Summary
Adenine Count
1280026 bp
Thymine Count
1263604 bp
Guanine Count
652409 bp
Cytosine Count
659780 bp
Genome Length
3856409 bp
Protein-coding Genes
3347 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| iron complex outermembrane recepter protein | SAMN05444338_11650 | Not Available | + | 3398187 - 3400355 | 81191.4 |
| outer membrane protein | SAMN05444338_11651 | Not Available | - | 3400502 - 3401806 | 50318.0 |
| putative abc transport system permease protein | SAMN05444338_11652 | Not Available | - | 3401799 - 3404216 | 91389.1 |
| putative abc transport system atp-binding protein | SAMN05444338_11653 | Not Available | - | 3404230 - 3404934 | 25963.5 |
| hlyd family secretion protein | SAMN05444338_11654 | Not Available | - | 3404959 - 3406197 | 47224.4 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN05444338_11655 | Not Available | + | 3406338 - 3407687 | 51371.9 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05444338_11656 | Not Available | + | 3407689 - 3409023 | 51972.2 |
| Trna-val | Not Available | Not Available | + | 3409091 - 3409168 | Not Available |
| abc transporter, permease/atp-binding protein | SAMN05444338_11658 | Not Available | + | 3409386 - 3411173 | 65851.5 |
| l-proline dehydrogenase | SAMN05444338_11659 | Not Available | - | 3411277 - 3412446 | 44517.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
