Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Histophilus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Histophilus |
| Species | Histophilus somni |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe; facultative anaerobe |
| Optimal temperature | 35 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Histophilus somni 2336
Accession NumberNC_010519.1
Gene Summary
Adenine Count
704511 bp
Thymine Count
713160 bp
Guanine Count
435567 bp
Cytosine Count
410619 bp
Genome Length
2263857 bp
Protein-coding Genes
1920 genes
Non-Coding Genes
228 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminoacyl-histidine dipeptidase | HSM_RS09785 | Not Available | + | 2148666 - 2150126 | 53635.4 |
| dna mismatch repair protein muts | HSM_RS09790 | Not Available | - | 2150274 - 2152844 | 96064.1 |
| shikimate dehydrogenase | HSM_RS09795 | Not Available | - | 2152986 - 2153801 | 30052.2 |
| sua5/ycio/yrdc/ywlc family protein | HSM_RS09800 | Not Available | - | 2153805 - 2154356 | 20484.9 |
| type i dna topoisomerase | HSM_RS09805 | Not Available | - | 2154353 - 2154901 | 20932.4 |
| yqge/algh family protein | HSM_RS09810 | Not Available | + | 2155035 - 2155598 | 21405.2 |
| holliday junction resolvase ruvx | HSM_RS09815 | Not Available | + | 2155598 - 2156023 | 15575.7 |
| deor/glpr family dna-binding transcription regulator | HSM_RS09820 | Not Available | - | 2156024 - 2156782 | 27983.3 |
| l-threonate dehydrogenase | HSM_RS09825 | Not Available | + | 2156953 - 2157861 | 31522.4 |
| 3-oxo-tetronate kinase | HSM_RS09830 | Not Available | + | 2157863 - 2159104 | 44486.3 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling