Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Histophilus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Histophilus |
| Species | Histophilus somni |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe; facultative anaerobe |
| Optimal temperature | 35 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Histophilus somni 2336
Accession NumberNC_010519.1
Gene Summary
Adenine Count
704511 bp
Thymine Count
713160 bp
Guanine Count
435567 bp
Cytosine Count
410619 bp
Genome Length
2263857 bp
Protein-coding Genes
1920 genes
Non-Coding Genes
228 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| soxr reducing system rsec family protein | HSM_RS02055 | Not Available | - | 469196 - 469630 | 15919.9 |
| sigma-e factor regulatory protein rseb | HSM_RS02060 | Not Available | - | 469638 - 470576 | 36363.5 |
| sigma-e factor negative regulatory protein | HSM_RS02065 | Not Available | - | 470640 - 471224 | 22337.7 |
| rna polymerase sigma factor rpoe | HSM_RS02070 | Not Available | - | 471257 - 471832 | 21813.0 |
| succinate dehydrogenase assembly factor 2 | HSM_RS02075 | Not Available | - | 471938 - 472192 | 10286.4 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | HSM_RS02080 | Not Available | - | 472366 - 473007 | 23079.3 |
| glucuronate isomerase | HSM_RS02085 | Not Available | - | 473055 - 474458 | 54082.5 |
| mfs transporter | HSM_RS02090 | Not Available | - | 474468 - 475883 | 52737.6 |
| glycoside hydrolase family 3 protein | HSM_RS02095 | Not Available | - | 475909 - 477669 | 65301.4 |
| had family hydrolase | HSM_RS02100 | Not Available | - | 477711 - 478526 | 30846.6 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling