Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Histophilus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Histophilus |
| Species | Histophilus somni |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe; facultative anaerobe |
| Optimal temperature | 35 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Histophilus somni 2336
Accession NumberNC_010519.1
Gene Summary
Adenine Count
704511 bp
Thymine Count
713160 bp
Guanine Count
435567 bp
Cytosine Count
410619 bp
Genome Length
2263857 bp
Protein-coding Genes
1920 genes
Non-Coding Genes
228 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Type ii toxin-antitoxin system rele/pare family toxin | HSM_RS05945 | Not Available | + | 1314204 - 1314455 | 9868.2 |
| Helix-turn-helix transcriptional regulator | HSM_RS05950 | Not Available | + | 1314439 - 1314756 | 11686.0 |
| Tail fibers | HSM_RS05955 | Not Available | - | 1314792 - 1316891 | 77789.9 |
| Tail formation protein i | HSM_RS05960 | Not Available | - | 1316937 - 1317491 | 20957.4 |
| Baseplate assembly protein | HSM_RS05965 | Not Available | - | 1317481 - 1318395 | 34148.9 |
| Baseplate assembly protein w | HSM_RS05970 | Not Available | - | 1318379 - 1318735 | 13851.0 |
| Baseplate assembly protein v | HSM_RS05975 | Not Available | - | 1318735 - 1319346 | 21640.4 |
| type ii toxin-antitoxin system rele/pare family toxin | HSM_RS05980 | Not Available | - | 1319575 - 1319922 | 13407.0 |
| hypothetical protein | HSM_RS05985 | Not Available | - | 1319910 - 1320194 | 10765.7 |
| Tail tape measure protein | HSM_RS05990 | Not Available | - | 1320349 - 1322847 | 90492.2 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling