Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Histophilus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Histophilus |
| Species | Histophilus somni |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe; facultative anaerobe |
| Optimal temperature | 35 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Histophilus somni 2336
Accession NumberNC_010519.1
Gene Summary
Adenine Count
704511 bp
Thymine Count
713160 bp
Guanine Count
435567 bp
Cytosine Count
410619 bp
Genome Length
2263857 bp
Protein-coding Genes
1920 genes
Non-Coding Genes
228 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| autoinducer 2 abc transporter atp-binding protein lsra | HSM_RS10030 | Not Available | + | 2203461 - 2204969 | 55545.3 |
| autoinducer 2 abc transporter permease lsrc | HSM_RS10035 | Not Available | + | 2204978 - 2205976 | 35371.8 |
| autoinducer 2 abc transporter permease lsrd | HSM_RS10040 | Not Available | + | 2205973 - 2206956 | 34643.8 |
| autoinducer 2 abc transporter substrate-binding protein lsrb | HSM_RS10045 | Not Available | + | 2207069 - 2208088 | 36733.1 |
| 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | HSM_RS10050 | Not Available | + | 2208107 - 2208985 | 31794.3 |
| (4s)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | HSM_RS10055 | Not Available | + | 2209051 - 2209353 | 12231.7 |
| ribulose-phosphate 3-epimerase | HSM_RS10060 | Not Available | + | 2209346 - 2210056 | 26703.6 |
| 30s ribosomal protein s10 | HSM_RS10065 | Not Available | + | 2210318 - 2210629 | 11767.3 |
| 50s ribosomal protein l3 | HSM_RS10070 | Not Available | + | 2210646 - 2211272 | 22502.2 |
| 50s ribosomal protein l4 | HSM_RS10075 | Not Available | + | 2211288 - 2211890 | 22039.8 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling