Histophilus somni 2336

Gram-negativeRodAerobe; facultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Histophilus

Description

Histophilus somni 2336 is a Gram-negative, rod-shaped bacterium that demonstrates both aerobic and facultative anaerobic growth capabilities. This microbe thrives optimally at a temperature of 35.0°C, a condition that aligns with the physiological environment of its host. Histophilus somni is primarily host-associated, indicating a close relationship with its biological hosts, which may influence its metabolic and reproductive processes. As a member of the diverse microbial community found within animal hosts, H. somni 2336 may play a role in the complex interactions between host organisms and their microbial flora. Its capacity to adapt to both aerobic and anaerobic conditions suggests that it can exploit a range of environmental niches within the host, contributing to its survival and proliferation in varied microenvironments. This adaptability may also facilitate its involvement in host-associated metabolic processes or interactions with other microbial species, underscoring the importance of studying this bacterium within the context of its ecological niche. Understanding the dynamics of H. somni 2336 in its host environment could provide insights into microbial interactions and their implications for host health and disease.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusHistophilus
SpeciesHistophilus somni
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe; facultative anaerobe
Optimal temperature35
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Histophilus somni 2336

Accession NumberNC_010519.1

Gene Summary

Adenine Count

704511 bp

Thymine Count

713160 bp

Guanine Count

435567 bp

Cytosine Count

410619 bp

Genome Length

2263857 bp

Protein-coding Genes

1920 genes

Non-Coding Genes

228 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
yggl family proteinHSM_RS09390Not Available-2071781 - 207211913386.9
lysr family transcriptional regulatorHSM_RS09395Not Available-2072217 - 207310134043.5
transposaseHSM_RS09400Not Available+2073214 - 207468754916.4
histidine phosphatase family proteinHSM_RS09405Not Available+2074705 - 207530422472.9
duf302 domain-containing proteinHSM_RS09410Not Available-2075444 - 207589316091.7
trna (guanosine(46)-n7)-methyltransferase trmbHSM_RS09415Not Available-2075905 - 207666028949.8
a/g-specific adenine glycosylaseHSM_RS09420Not Available+2076806 - 207791842694.2
oxidative damage protection proteinHSM_RS09425Not Available+2077921 - 207819610802.0
membrane-bound lytic murein transglycosylase mltcHSM_RS09430Not Available+2078203 - 207929440796.1
phospho-sugar mutaseHSM_RS09435Not Available+2079389 - 208104460057.6

Displaying genes 1941 – 1950 of 2148 in total

Pathways

23 pathways

Metabolites

88 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0012554N-acetyl-beta-D-glucosaminyl-(1->4)-1,6-anhydro-N-acetyl-beta-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-diaminoheptanedioate-D-alanineC37H57N7O20Not availableNot available
Average919.893Da
Monoisotopic919.366934423Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da

Displaying 1–10 of 88 metabolites