Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus halophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Algoriphagus halophilus
Accession NumberFSRC00000000.1
Gene Summary
Adenine Count
1505717 bp
Thymine Count
1513001 bp
Guanine Count
987789 bp
Cytosine Count
971672 bp
Genome Length
4978503 bp
Protein-coding Genes
4134 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tagaturonate reductase | SAMN05444394_0153 | Not Available | - | 159795 - 161201 | 53087.8 |
| transcriptional regulator, laci family | SAMN05444394_0154 | Not Available | - | 161299 - 162315 | 37975.7 |
| gluconate 5-dehydrogenase | SAMN05444394_0155 | Not Available | - | 162366 - 163154 | 28001.8 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase | SAMN05444394_0156 | Not Available | - | 163157 - 163996 | 31720.6 |
| polygalacturonase | SAMN05444394_0157 | Not Available | + | 164472 - 166145 | 61414.5 |
| lysophospholipase l1 | SAMN05444394_0158 | Not Available | + | 166147 - 166905 | 28984.2 |
| pectinesterase | SAMN05444394_0159 | Not Available | + | 166960 - 168861 | 71026.7 |
| catechol 2,3-dioxygenase | SAMN05444394_0160 | Not Available | + | 168946 - 169329 | 14218.3 |
| 3-dehydro-l-gulonate 2-dehydrogenase | SAMN05444394_0161 | Not Available | + | 169368 - 170381 | 37190.6 |
| predicted dehydrogenase | SAMN05444394_0162 | Not Available | + | 170378 - 171421 | 37245.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.