Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio parahaemolyticus RIMD 2210633
Accession NumberNC_004603.1
Gene Summary
Adenine Count
893352 bp
Thymine Count
902673 bp
Guanine Count
745919 bp
Cytosine Count
746614 bp
Genome Length
3288558 bp
Protein-coding Genes
2887 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | VP_RS00340 | P44480 | + | 73819 - 74430 | 21764.6 |
| xanthosine phosphorylase | VP_RS00345 | P45563 | - | 74536 - 75360 | 29834.2 |
| lysr family transcriptional regulator | VP_RS00350 | Q04778 | + | 75482 - 76387 | 34127.0 |
| glutathione-disulfide reductase | VP_RS00355 | P06715 | - | 76469 - 77824 | 48792.3 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | VP_RS00360 | P37634 | - | 78084 - 78923 | 32241.6 |
| oligopeptidase a | VP_RS00365 | P27237 | + | 79323 - 81365 | 76991.8 |
| transcriptional regulator asnc | VP_RS00370 | P0ACI8 | - | 81432 - 81896 | 17269.9 |
| eal domain-containing protein | VP_RS00375 | Q8EJM6 | + | 82067 - 85150 | 118261.0 |
| class i sam-dependent methyltransferase | VP_RS00380 | Q87TJ6 | + | 85240 - 86019 | 28375.2 |
| hypothetical protein | VP_RS00385 | Not Available | + | 86206 - 86778 | 20908.3 |
Pathways
6 pathways
PreQ0 Metabolism
PreQ0 Metabolism
Selenium Metabolism
Selenium Metabolism
Guanine and Guanosine Salvage
Guanine and Guanosine Salvage
O-Antigen Building Blocks Biosynthesis
O-Antigen Building Blocks Biosynthesis
Virulence (virB operon activation)
Virulence (virB operon activation)
Palmitate Biosynthesis 2
Palmitate Biosynthesis 2

